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I create a ~/bin in the applicable user's account which limits it to being accessible and run only by the specific user. /root/bin is usually cront.something scripts wired into crontab (nice short path). Anything else root needs a script for makes sense to keep inside the builpack directory so it's a "./something" run. /home/user/bin is user specific things.

I guess I could do user specific aliases to these locations or add the locations into the path but but specifying the path or going to that directory doesn't slow me down enough.