+ 0 Votes FAT32 vs. NTFS - Depends on end use. Charles Bundy 4 years ago In your case if it's just a vanilla desktop WinXP install go with NTFS. Several open source tools exist to work with NTFS file systems (NT Offline Password/Registry editor, SysRescue) FAT32 is typically faster than NTFS at the expense of security. Size wise FAT32 supports up to 2TB and some of my media recorders require FAT32 for streaming. I think the folks who are quoting GB limits on partitions might mean there are FDISK limitations on partition creation, not FAT32 limits.