Java, a headache or getting ready for the future?

From setting up your segurida very high, disable or uninstall the browser on the PC, there is no doubt that their existence gaps have complicated the manager of information security and IT support office.
After deciding that the three procedures are necessary in an office, as we track them?
They are the cheklist, spreadsheets when deciding whether and when not. And finally talks with first line support so you know what to say, do and record.
All this with Java, now, what will be the next storm?